Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802389.1_cds_XP_016479113.1_7030
CDS Infomation

[gene=LOC107800456] [db_xref=GeneID:107800456] [protein=WAT1-related protein At5g07050-like] [protein_id=XP_016479113.1] [location=complement(join(80437..80683,80793..80944,81644..81802,81888..82137,82234..82350,82710..82772,82900..82950,100707..101085,104638..104701))] [gbkey=CDS]
Sequence

ATGGCGGCAATAGAGGATCAAATTCCCCATCATCCAAGATTATTCCAACTACTGGCCCAT
TGGTTTGCTAGTACAGCAACAACGGGTACTCAAACCAAAGACACGATCGAAAACCTCGAA
ACGGAGACCTTGACGAACGGAGATGATGAAACTCCGGCGAAACGCCGGCAAGGCTGTGAA
CTAGCGGAAACACATTTACATGGCTTTGGGACTGATTTTAGGAGTTTAATGGAGAAGCCA
CAACTGCTGTGTTTTGCTAGATCTGCTGCTGCATTTTCTGCCATGTTTGGAGATACATTT
TGGCTGAGTTTTAATGGAGTTCGAACAACAATTTTGCGGCTGTTTCACGTTGCAACGCAG
CTGATTTTTGAGGCCGTTTTTTATTGCAGTTTTGGGCTGGGTTTTAGCTCCTTTTATGGG
CAGATTTTTGAGGTTGTTTTAAAACATGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCT
CTTGTTCTTGAAAGAAAACTCAGACCAAAGATGACTTTCATGATGTTCTTGCAAATTTTT
GTATTGGGCCTTCTAGGGCCAGTGATTGATCAAAACTTCTACTATATGGGACTTAAGTTT
ACATCCCCAACATTCTCATGTGCCATGAGCAACATGCTTCCTGCAATGACATTTGTCATG
GCTGTCCTCTGCAGAATGGAGAAGGTGCATATAAAGAAGTTGAGATGCCAAGCAAAGGTT
GTGGGTACTATAGTGACAGTGGCTGGAGCCATGTTGATGACATTGTACAAAGGACATGTT
ATTAATTTGGTTTGGTCAAATAATATCCATACAAATACTTCTAATGTTCCTGAACCCAAT
GAAGCTACTGATAAAGATTGGCTTAAAGGTTCAATCCTTCTAATTCTTGCCACTTTTGCA
TGGGCTTCTTTCTTTATACTTCAGAATGTTACAATGAGGAAGTACACTGCTCCACTTTCT
CTAACTGCACTTGTTTGCTTCATGGGAACTTTGCAATCAATTGCTGTCACCTTAGTGATG
GAACATAAAACTTCTGCTTGGGCCATTGGTTTTGACATGAACCTTCTTGCTGCTGCCTAT
GCTGGTATTGTATCATCAAGTCTTGCATACTATGTTCAAGGTCTTGTAATGGAGAAAAGA
GGACCTGTTTTTGTGACTGCTTTCAGTCCATTGATGATGATCATTGTTGCTATTATGGGC
TCTTTCATTCTTGCTGAAAAAATATATCTTGGAGGTGTGCTAGGAGCAGTGCTAATTGTG
GCTGGACTATACTCAGTTTTATGGGGAAAATACAAGGAATATAAGGAGAAAGAAATTGAG
GCTGCAATTCCTGAACCAGTGAAAGTAGTTACAGAGAACAACCAAATGATGATTTTAGAA
GATAGAGAAGTAAATGACATAGAAATGCAAAGTACTGCAGTAGCCATTAGTGTTTCAATG
TCACAGCCTCCAATGTTGGCTAAAGAAGCACCAAAAGCTTGA

Peptide Sequence

PEP ID

XP_016479113.1
PEP Infomation

PREDICTED: WAT1-related protein At5g07050-like [Nicotiana tabacum]
Sequence

MAAIEDQIPHHPRLFQLLAHWFASTATTGTQTKDTIENLETETLTNGDDETPAKRRQGCE
LAETHLHGFGTDFRSLMEKPQLLCFARSAAAFSAMFGDTFWLSFNGVRTTILRLFHVATQ
LIFEAVFYCSFGLGFSSFYGQIFEVVLKHAFATAAIAPFALVLERKLRPKMTFMMFLQIF
VLGLLGPVIDQNFYYMGLKFTSPTFSCAMSNMLPAMTFVMAVLCRMEKVHIKKLRCQAKV
VGTIVTVAGAMLMTLYKGHVINLVWSNNIHTNTSNVPEPNEATDKDWLKGSILLILATFA
WASFFILQNVTMRKYTAPLSLTALVCFMGTLQSIAVTLVMEHKTSAWAIGFDMNLLAAAY
AGIVSSSLAYYVQGLVMEKRGPVFVTAFSPLMMIIVAIMGSFILAEKIYLGGVLGAVLIV
AGLYSVLWGKYKEYKEKEIEAAIPEPVKVVTENNQMMILEDREVNDIEMQSTAVAISVSM
SQPPMLAKEAPKA

Transcript Sequence

Gene sequence data has not been registered.